Avena sativa Markers Preview

Chromosome 1D @ 244593399



Genotype locations  
Marker Protocol Species Reference Chromosome Position Ref Alt
avgbs2_73311.1.41 Tinker QTL 2021 Avena sativa OT3098 v2 1D 244593399 C T
avgbs2_73311.1.16 GBS POGI v2 Avena sativa OT3098 v2 1D 244593399 C T
avgbs2_73311.1.43 GBS POGI v2 Avena sativa OT3098 v2 1D 244593399 T C
avgbs_cluster_15085.1.16 Tinker QTL 2021 Avena sativa OT3098 v2 1D 244593399 C T
avgbs_cluster_15085.1.43 Tinker QTL 2021 Avena sativa OT3098 v2 1D 244593399 T C
avgbs2_73311.1.43 Tinker QTL 2021 Avena sativa OT3098 v2 1D 244593399 T C
avgbs_cluster_15085.1.43 GBS POGI v2 Avena sativa OT3098 v2 1D 244593399 T C
avgbs2_73311.1.41 GBS POGI v2 Avena sativa OT3098 v2 1D 244593399 C T
avgbs2_73311.1.16 Tinker QTL 2021 Avena sativa OT3098 v2 1D 244593399 C T
avgbs_cluster_15085.1.16 GBS POGI v2 Avena sativa OT3098 v2 1D 244593399 C T
Flanking Sequence  

avgbs2_73311.1.41, avgbs2_73311.1.41

TGCAGCCCTCACGCGYGCCCGCCCACCTGCGTKCCTGCCR[C/T]GYCACTGCCGTTGGGCCCGCTCG


avgbs_cluster_15085.1.43, avgbs_cluster_15085.1.43

TGCAGCCCTCACGCGYGCCCGCCCACCTGCGTKCCTGCCRCG[T/C]CACTGCCGTTGGGCCCGCTCG


avgbs2_73311.1.43, avgbs2_73311.1.43

TGCAGCCCTCACGCGYGCCCGCCCACCTGCGTKCCTGCCRYG[T/C]CACTGCCGTTGGGCCCGCTCG


avgbs_cluster_15085.1.16, avgbs_cluster_15085.1.16

TGCAGCCCTCACGCG[C/T]GCCCGCCCACCTGCGTKCCTGCCRCGYCACTGCCGTTGGGCCCGCTCG


avgbs2_73311.1.16, avgbs2_73311.1.16

TGCAGCCCTCACGCG[C/T]GCCCGCCCACCTGCGTKCCTGCCRYGYCACTGCCGTTGGGCCCGCTCG
Related Markers  

Related Genotyped Markers: These genotyped markers share either the same name as one or more markers at this variant or are located at the same position but have different allele values

Related Mapped Markers: These mapped markers have the same name as a marker at this variant

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Version
cffff3420   sgn-418.0
Fri Apr 25 07:54:17 2025 -0400

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T3 is part of the Wheat CAP project, supported by Agriculture and Food Research Initiative Competitive Grant no. 2011-68002-30029 from the USDA National Institute of Food and Agriculture.