Avena sativa Markers Preview

Chromosome 3C @ 5338057



Genotype locations  
Marker Protocol Species Reference Chromosome Position Ref Alt
avgbs2_187662.1.26 GBS POGI v2 Avena sativa OT3098 v2 3C 5338057 C T
avgbs_cluster_38381.1.26 Tinker QTL 2021 Avena sativa OT3098 v2 3C 5338057 C T
avgbs_cluster_38381.1.18 Tinker QTL 2021 Avena sativa OT3098 v2 3C 5338057 C T
avgbs2_187662.1.18 GBS POGI v2 Avena sativa OT3098 v2 3C 5338057 C T
avgbs_cluster_38381.1.18 GBS POGI v2 Avena sativa OT3098 v2 3C 5338057 C T
avgbs_cluster_38381.1.26 GBS POGI v2 Avena sativa OT3098 v2 3C 5338057 C T
avgbs2_187662.1.26 Tinker QTL 2021 Avena sativa OT3098 v2 3C 5338057 C T
avgbs2_187662.1.18 Tinker QTL 2021 Avena sativa OT3098 v2 3C 5338057 C T
Flanking Sequence  

avgbs_cluster_38381.1.18, avgbs_cluster_38381.1.18

TGCAGTGCGTACGGGGA[C/T]GGCGACGYGGGAGCTCCCGASCTCGTTGTCATGAGCCGTGCCTCGG


avgbs2_187662.1.26, avgbs2_187662.1.26

TGCAGTGCGTACGGGGAYGGCGACG[C/T]GGGAGCTCCCGACCTCGTTGTCATGAGCCGTGCCTCGG


avgbs_cluster_38381.1.26, avgbs_cluster_38381.1.26

TGCAGTGCGTACGGGGAYGGCGACG[C/T]GGGAGCTCCCGASCTCGTTGTCATGAGCCGTGCCTCGG


avgbs2_187662.1.18, avgbs2_187662.1.18

TGCAGTGCGTACGGGGA[C/T]GGCGACGYGGGAGCTCCCGACCTCGTTGTCATGAGCCGTGCCTCGG
Related Markers  

Related Genotyped Markers: These genotyped markers share either the same name as one or more markers at this variant or are located at the same position but have different allele values

Related Mapped Markers: These mapped markers have the same name as a marker at this variant

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Version
9bb5a2f   sgn-418.0
Wed Apr 16 14:18:50 2025 -0400

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T3 is part of the Wheat CAP project, supported by Agriculture and Food Research Initiative Competitive Grant no. 2011-68002-30029 from the USDA National Institute of Food and Agriculture.